STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15725.1S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein; KEGG: gvh:HMPREF9231_1173 1.1e-230 S-adenosyl-L-homocysteine hydrolase K01251; Psort location: Cytoplasmic, score: 9.97. (528 aa)    
Predicted Functional Partners:
KXA15724.1
Amidohydrolase family protein; KEGG: bde:BDP_0473 1.8e-177 hydrolase.
 
  
 0.947
KXA15726.1
KEGG: jde:Jden_0493 3.6e-117 DNA repair protein RadA K04485; Psort location: Cytoplasmic, score: 7.50.
     
 0.849
KXA15373.1
KEGG: gvh:HMPREF9231_0819 0. metE; 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.848
KXA15723.1
Cupin family protein.
 
     0.843
KXA15253.1
KEGG: gvh:HMPREF9231_0802 1.5e-198 metK; methionine adenosyltransferase K00789; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.809
KXA15720.1
KEGG: pva:Pvag_0007 1.2e-27 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.740
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.737
KXA15721.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 3.3e-20 fliY; cystine transporter subunit K02424.
 
   
 0.717
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
 
 0.710
KXA17595.1
KEGG: pen:PSEEN4477 3.8e-207 secA, azi, div; preprotein translocase subunit SecA K03070; Psort location: Cytoplasmic, score: 9.97.
  
    0.699
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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