STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15733.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (45 aa)    
Predicted Functional Partners:
KXA15732.1
Diacylglycerol kinase catalytic domain protein; KEGG: ase:ACPL_7058 1.2e-24 putative lipid kinase yegS-like protein K07029.
       0.565
KXA15734.1
ErfK/YbiS/YcfS/YnhG; KEGG: paw:PAZ_c23670 0.00040 putative L,D-transpeptidase.
       0.513
KXA15735.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.513
Pgm
KEGG: gva:HMPREF0424_0298 3.9e-301 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835; Psort location: Cytoplasmic, score: 7.50.
       0.501
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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