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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15736.1KEGG: gvh:HMPREF9231_1164 0. peptidase, S9A/B/C family, catalytic domain protein K01354; Psort location: Cytoplasmic, score: 7.50. (858 aa)    
Predicted Functional Partners:
KXA15735.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.849
KXA15737.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 3.4e-89 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
       0.729
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.692
KXA15734.1
ErfK/YbiS/YcfS/YnhG; KEGG: paw:PAZ_c23670 0.00040 putative L,D-transpeptidase.
     
 0.659
KXA16998.1
Putative hydrolase; KEGG: pfd:PFDG_00583 1.3e-13 hypothetical protein similar to methionine aminopeptidase; K01265 methionyl aminopeptidase; Psort location: Cellwall, score: 8.97.
   
  
 0.658
KXA15543.1
Endopeptidase Clp; KEGG: gvh:HMPREF9231_0913 6.0e-99 putative ATP-dependent Clp protease, proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.657
KXA15160.1
KEGG: gvh:HMPREF9231_0695 4.1e-123 purC; phosphoribosylaminoimidazole succinocarboxamide synthase K01923; Psort location: Cytoplasmic, score: 7.50.
       0.639
KXA15186.1
KEGG: gvh:HMPREF9231_0908 1.4e-248 putative adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 7.50.
       0.639
KXA15623.1
G5 domain protein; KEGG: bde:BDP_0983 3.2e-15 TraG-like protein.
       0.534
KXA15424.1
Putative prolyl aminopeptidase; KEGG: gvg:HMPREF0421_20703 7.1e-254 pap; prolyl aminopeptidase; Psort location: Cytoplasmic, score: 9.67.
     
 0.525
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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