STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15738.1Transglycosylase; KEGG: bde:BDP_1801 8.4e-251 Penicillin-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (807 aa)    
Predicted Functional Partners:
KXA15914.1
KEGG: gvg:HMPREF0421_20139 7.5e-227 pbpA; penicillin binding protein transpeptidase domain-containing protein K05364; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.892
KXA15737.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 3.4e-89 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
       0.848
KXA17027.1
KEGG: gvh:HMPREF9231_1089 1.0e-293 penicillin-binding protein, transpeptidase domain protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 
 0.831
KXA17022.1
KEGG: kfl:Kfla_2886 8.3e-54 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.715
KXA17020.1
KEGG: gvh:HMPREF9231_1082 1.3e-224 murC; UDP-N-acetylmuramate--L-alanine ligase K01924; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.708
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.704
KXA17021.1
KEGG: gvh:HMPREF9231_1083 1.4e-177 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.697
KXA17531.1
YceG family protein; KEGG: aai:AARI_17280 1.3e-46 aminodeoxychorismate lyase K07082.
 
   
 0.695
KXA17025.1
KEGG: gvh:HMPREF9231_1087 5.0e-198 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.653
KXA17245.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_1080 4.1e-29 Macrolide export ATP-binding/permease protein macB K09811; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.647
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.