STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15611.1Ham1 family protein; KEGG: gvh:HMPREF9231_1158 4.9e-104 Ham1 family protein; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 7.50. (227 aa)    
Predicted Functional Partners:
KXA15610.1
KEGG: gvg:HMPREF0421_20397 8.5e-132 rph; tRNA nucleotidyltransferase K00989; Psort location: Cytoplasmic, score: 7.50.
 
    0.990
KXA17004.1
Glutamate racemase; KEGG: gvh:HMPREF9231_1065 8.6e-123 murI; glutamate racemase K01776.
 
    0.964
KXA16949.1
Thymidylate synthase; KEGG: gvg:HMPREF0421_20547 8.6e-155 thyA; thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.830
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.807
KXA15196.1
KEGG: gvh:HMPREF9231_0680 1.2e-219 putative coproporphyrinogen dehydrogenase; K02495 oxygen-independent coproporphyrinogen III oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 0.798
SecG
Preprotein translocase, SecG subunit; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.792
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.780
Gap
KEGG: gvg:HMPREF0421_21168 2.0e-185 gap; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.734
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.706
KXA15257.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.698
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.