STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15622.1Thioredoxin; KEGG: gvg:HMPREF0421_20416 5.1e-54 trxA; thioredoxin; Psort location: Cytoplasmic, score: 9.67. (118 aa)    
Predicted Functional Partners:
KXA15300.1
Peroxiredoxin; KEGG: gvg:HMPREF0421_20840 8.8e-98 ahpC; peroxiredoxin K03386; Psort location: Cytoplasmic, score: 9.97.
  
 0.999
KXA16061.1
KEGG: gvg:HMPREF0421_21332 0. nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.995
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
  
 0.909
KXA15937.1
KEGG: gvh:HMPREF9231_1402 2.7e-142 trxB; thioredoxin-disulfide reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
 0.884
KXA15532.1
KEGG: gvg:HMPREF0421_20626 4.0e-93 cypB; peptidyl-prolyl cis-trans isomerase K03767; Psort location: Cytoplasmic, score: 9.97.
  
 0.861
RpoB
KEGG: gvg:HMPREF0421_21209 0. rpoB; DNA-directed RNA polymerase subunit beta K03043; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.858
KXA16237.1
DnaJ domain protein; KEGG: apb:SAR116_1614 1.2e-36 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
   
 0.854
KXA15288.1
KEGG: apb:SAR116_1614 6.9e-50 DnaJ family molecular chaperone K03686; Psort location: Cytoplasmic, score: 9.97.
   
 0.854
KXA15841.1
Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.825
KXA15714.1
KEGG: apb:SAR116_1582 4.1e-52 NusA antitermination factor K02600; Psort location: Cytoplasmic, score: 7.50.
   
   0.816
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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