STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15530.1Putative dUTP diphosphatase; KEGG: gvh:HMPREF9231_0929 1.8e-74 dut; dUTP diphosphatase K01520; Psort location: Cytoplasmic, score: 7.50. (162 aa)    
Predicted Functional Partners:
KXA15529.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.927
KXA15531.1
KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.
     
 0.916
KXA16949.1
Thymidylate synthase; KEGG: gvg:HMPREF0421_20547 8.6e-155 thyA; thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.
  
 0.880
KXA15528.1
Hypothetical protein; KEGG: ddi:DDB_G0268430 2.6e-06 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1.
     
 0.831
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.686
KXA16061.1
KEGG: gvg:HMPREF0421_21332 0. nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.670
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.670
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.654
KXA15177.1
uracil-DNA glycosylase; KEGG: gvg:HMPREF0421_20654 6.4e-111 ung; uracil-DNA glycosylase K03648; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.654
KXA16641.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.643
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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