KXA15531.1 protein (Gardnerella vaginalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KXA15531.1

KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50. (779 aa)

Predicted Functional Partners:

KXA15680.1

0.953

KXA16089.1

0.942

KXA15841.1

0.942

RpsL

0.941

RpsI

0.938

KXA15698.1

0.936

KXA15702.1

0.936

RplT

0.935

RplE

0.933

KXA15700.1

0.933

Your Current Organism:

Gardnerella vaginalis

NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KXA15531.1	KXA15680.1	HMPREF3204_01034	HMPREF3204_00945	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	0.953
KXA15531.1	KXA15698.1	HMPREF3204_01034	HMPREF3204_00963	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.	0.936
KXA15531.1	KXA15700.1	HMPREF3204_01034	HMPREF3204_00965	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S5; KEGG: apb:SAR116_2408 1.1e-35 30S ribosomal protein S5 K02988; Psort location: Cytoplasmic, score: 9.97.	0.933
KXA15531.1	KXA15702.1	HMPREF3204_01034	HMPREF3204_00967	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L15; KEGG: apb:SAR116_2410 9.9e-19 50S ribosomal protein L15 K02876.	0.936
KXA15531.1	KXA15841.1	HMPREF3204_01034	HMPREF3204_00912	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.	0.942
KXA15531.1	KXA16089.1	HMPREF3204_01034	HMPREF3204_00890	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.	0.942
KXA15531.1	RplE	HMPREF3204_01034	HMPREF3204_00961	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L5; Psort location: Cytoplasmic, score: 7.50.	0.933
KXA15531.1	RplT	HMPREF3204_01034	HMPREF3204_00406	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.	0.935
KXA15531.1	RpsI	HMPREF3204_01034	HMPREF3204_00946	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S9; KEGG: apb:SAR116_0492 2.7e-25 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97.	0.938
KXA15531.1	RpsL	HMPREF3204_01034	HMPREF3204_00310	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S12; KEGG: apb:SAR116_2386 2.0e-45 30S ribosomal protein S12 K02950; Psort location: Cytoplasmic, score: 9.97.	0.941
KXA15680.1	KXA15531.1	HMPREF3204_00945	HMPREF3204_01034	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.	0.953
KXA15680.1	KXA15698.1	HMPREF3204_00945	HMPREF3204_00963	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.	0.999
KXA15680.1	KXA15700.1	HMPREF3204_00945	HMPREF3204_00965	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S5; KEGG: apb:SAR116_2408 1.1e-35 30S ribosomal protein S5 K02988; Psort location: Cytoplasmic, score: 9.97.	0.999
KXA15680.1	KXA15702.1	HMPREF3204_00945	HMPREF3204_00967	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L15; KEGG: apb:SAR116_2410 9.9e-19 50S ribosomal protein L15 K02876.	0.999
KXA15680.1	KXA15841.1	HMPREF3204_00945	HMPREF3204_00912	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.	0.997
KXA15680.1	KXA16089.1	HMPREF3204_00945	HMPREF3204_00890	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.	0.999
KXA15680.1	RplE	HMPREF3204_00945	HMPREF3204_00961	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L5; Psort location: Cytoplasmic, score: 7.50.	0.999
KXA15680.1	RplT	HMPREF3204_00945	HMPREF3204_00406	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.	0.999
KXA15680.1	RpsI	HMPREF3204_00945	HMPREF3204_00946	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S9; KEGG: apb:SAR116_0492 2.7e-25 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97.	0.999
KXA15680.1	RpsL	HMPREF3204_00945	HMPREF3204_00310	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S12; KEGG: apb:SAR116_2386 2.0e-45 30S ribosomal protein S12 K02950; Psort location: Cytoplasmic, score: 9.97.	0.999

page 1 of 6

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About