STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15533.1KEGG: pfe:PSF113_0026 5.0e-47 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00. (226 aa)    
Predicted Functional Partners:
KXA15534.1
KEGG: gvg:HMPREF0421_20629 2.6e-121 ABC transporter ATP-binding protein K02071; Psort location: CytoplasmicMembrane, score: 8.78.
 0.999
KXA15535.1
NLPA lipoprotein; KEGG: pfe:PSF113_0025 2.1e-57 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 9.51.
 0.999
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.782
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.708
KXA16177.1
KEGG: gvh:HMPREF9231_0081 1.2e-171 2-dehydropantoate 2-reductase K00077; Psort location: Cytoplasmic, score: 7.50.
  
    0.689
KXA15532.1
KEGG: gvg:HMPREF0421_20626 4.0e-93 cypB; peptidyl-prolyl cis-trans isomerase K03767; Psort location: Cytoplasmic, score: 9.97.
       0.673
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
     
 0.593
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
   
  0.532
KXA16279.1
KEGG: llk:LLKF_1844 4.0e-54 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.508
KXA16943.1
Cobalt transport protein; KEGG: bde:BDP_1327 3.4e-112 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.479
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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