STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15411.1KEGG: gvh:HMPREF9231_0874 6.0e-154 dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97. (304 aa)    
Predicted Functional Partners:
KXA16849.1
Hypothetical protein; KEGG: gvg:HMPREF0421_21191 0. metallo-beta-lactamase; K12574 ribonuclease J; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.787
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.785
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.732
KXA15971.1
KEGG: gvg:HMPREF0421_20040 8.9e-176 asd; aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.714
KXA15412.1
Amidohydrolase family protein; KEGG: agr:AGROH133_13364 5.8e-13 putative amidohydrolase protein K07046; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.674
KXA15413.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_1396 1.5e-18 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.669
KXA15881.1
Putative N-acetylmannosamine-6-P epimerase; KEGG: gvh:HMPREF9231_0054 9.2e-119 thiazole biosynthesis protein ThiG-like protein; K01788 N-acylglucosamine-6-phosphate 2-epimerase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.654
KXA16949.1
Thymidylate synthase; KEGG: gvg:HMPREF0421_20547 8.6e-155 thyA; thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.635
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.628
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.618
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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