STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15412.1Amidohydrolase family protein; KEGG: agr:AGROH133_13364 5.8e-13 putative amidohydrolase protein K07046; Psort location: Cytoplasmic, score: 7.50. (257 aa)    
Predicted Functional Partners:
KXA15414.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: gvg:HMPREF0421_20694 3.3e-137 fabG; 3-oxoacyl-ACP reductase K00059; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.934
KXA15413.1
Transporter, major facilitator family protein; KEGG: gdj:Gdia_1396 1.5e-18 glucose/galactose transporter K12373; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.882
KXA15415.1
KEGG: sen:SACE_3937 1.7e-126 mandelate racemase/muconate lactonizing enzyme; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.877
KXA15411.1
KEGG: gvh:HMPREF9231_0874 6.0e-154 dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.674
KXA15950.1
Putative L-fucose mutarotase; KEGG: gvg:HMPREF0421_20103 1.6e-68 fucU; ribose ABC transporter membrane protein; K02431 L-fucose mutarotase; Psort location: Cytoplasmic, score: 9.97.
 
     0.440
KXA17582.1
Transporter, major facilitator family protein; KEGG: apb:SAR116_1122 4.3e-06 tetracycline resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.431
KXA16092.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: gvg:HMPREF0421_20336 3.3e-146 aldo/keto reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.431
KXA15876.1
Dihydrodipicolinate synthetase family protein; KEGG: gvh:HMPREF9231_0059 5.9e-163 dihydrodipicolinate synthase K01714; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.407
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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