STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15416.1Sugar-binding domain protein; KEGG: ami:Amir_1824 1.5e-54 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.95. (347 aa)    
Predicted Functional Partners:
KXA15417.1
Hypothetical protein.
       0.661
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.646
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
   
 
 0.640
KXA15299.1
KEGG: gvh:HMPREF9231_0768 3.4e-192 IMP dehydrogenase family protein; K00088 IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.621
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.618
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.606
KXA17042.1
UDP-glucose 4-epimerase; KEGG: gva:HMPREF0424_1119 5.1e-173 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.559
KXA16851.1
Aminopeptidase P domain protein; KEGG: gvh:HMPREF9231_0349 4.6e-282 metallopeptidase family M24 K01262; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.536
Hup
DNA-binding protein HB1; KEGG: apb:SAR116_0125 5.8e-14 histone family protein DNA-binding protein K03530; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.536
KXA15199.1
UbiC transcription regulator-associated domain protein; KEGG: reh:H16_B1289 3.6e-14 phnF; phosphonate operon transcriptional regulator K02043; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.536
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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