STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15432.1KEGG: apb:SAR116_1967 4.1e-20 ABC transporter permease K15599; Psort location: CytoplasmicMembrane, score: 10.00. (263 aa)    
Predicted Functional Partners:
KXA15433.1
NMT1/THI5-like protein; KEGG: abu:Abu_1637 6.0e-11 two-component sensor histidine kinase.
 
 0.979
KXA16992.1
NMT1/THI5-like protein; KEGG: pfc:PflA506_0255 2.2e-05 tauA_2; taurine ABC transporter, periplasmic taurine-binding protein K15551.
 
 
 0.929
KXA15615.1
ABC transporter, ATP-binding protein; KEGG: bbp:BBPR_0362 9.2e-158 ABC transporter permease K02049; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.882
KXA15439.1
Putative aliphatic sulfonates transport permease protein SsuC; KEGG: pfc:PflA506_0253 1.6e-25 tauC; taurine ABC transporter permease K15552; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.812
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.770
KXA15437.1
Hypothetical protein; KEGG: pfl:PFL_0272 3.0e-14 tauA; taurine ABC transporter periplasmic taurine-binding protein K15551.
 
 
 0.770
KXA16991.1
Phosphotransferase enzyme family protein; KEGG: cfu:CFU_1573 2.1e-34 putative homoserine kinase type II, PnuC-associated, THI-regulated branch; Psort location: Cytoplasmic, score: 7.50.
  
    0.611
KXA16252.1
Phosphomethylpyrimidine kinase; KEGG: gvg:HMPREF0421_20209 1.7e-298 theD; phosphomethylpyrimidine kinase K00941; Psort location: Cytoplasmic, score: 7.50.
  
    0.608
KXA17040.1
Hypothetical protein.
    
  0.501
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.492
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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