STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15441.1KEGG: gva:HMPREF0424_0663 1.3e-158 lactate/malate dehydrogenase, NAD binding domain protein; K00016 L-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97. (307 aa)    
Predicted Functional Partners:
Pyk
Pyruvate kinase; KEGG: gvg:HMPREF0421_20976 5.7e-261 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
  
 0.974
PflB
KEGG: gvg:HMPREF0421_20633 0. pflB; formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.927
IlvE
KEGG: gvh:HMPREF9231_0841 1.9e-205 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 7.50.
  
 0.902
Pgi
KEGG: gvh:HMPREF9231_0314 0. glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.891
Tkt
Transketolase; KEGG: gvg:HMPREF0421_20791 0. tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
  
 0.885
Tal
Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
 0.883
Xfp
KEGG: gvg:HMPREF0421_20576 0. xfp; fructose-6-phosphate phosphoketolase.
    
 0.847
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.807
Eno
Phosphopyruvate hydratase; KEGG: gvg:HMPREF0421_20718 5.9e-227 eno; enolase K01689; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.785
KXA17218.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: gvg:HMPREF0421_20964 7.0e-192 sdhB; succinate dehydrogenase K00240; Psort location: Cytoplasmic, score: 9.89.
  
 
 0.667
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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