STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15355.1Hypothetical protein; KEGG: cfa:489960 2.8e-06 HS3ST4; heparan sulfate (glucosamine) 3-O-sulfotransferase 4; K09678 [heparan sulfate]-glucosamine 3-sulfotransferase 4. (270 aa)    
Predicted Functional Partners:
KXA15528.1
Hypothetical protein; KEGG: ddi:DDB_G0268430 2.6e-06 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1.
  
 0.757
KXA16661.1
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 2.8e-13 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.671
KXA15158.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 2.0e-100 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.671
KXA16812.1
Glycosyl hydrolase family 25; KEGG: bde:BDP_2061 1.4e-89 1,4-beta-N-acetylmuramidase.
  
 
 0.658
KXA15173.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.658
KXA16403.1
Putative sporulation initiation inhibitor protein Soj; KEGG: sen:SACE_5241 1.4e-81 chromosome partitioning protein K03496; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.540
KXA15935.1
Sporulation initiation inhibitor protein Soj family protein; KEGG: bde:BDP_2273 5.6e-119 parA; chromosome partitioning protein PrA K03496; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.540
KXA15983.1
Hypothetical protein; KEGG: msu:MS1486 0.0042 gumC; GumC protein; K00903 protein-tyrosine kinase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.540
KXA15447.1
Hypothetical protein.
       0.527
KXA17249.1
Peptidase family M13; KEGG: gvh:HMPREF9231_0636 0. peptidase family M13 K07386; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.459
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.