STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15367.1Hydrolase, P-loop family; KEGG: rop:ROP_62420 4.8e-19 ATPase K06925; Psort location: Cytoplasmic, score: 7.50. (171 aa)    
Predicted Functional Partners:
KXA15370.1
Putative glycoprotease GCP; KEGG: gvg:HMPREF0421_20740 4.8e-184 gcp; O-sialoglycoprotein endopeptidase K01409; Psort location: Cytoplasmic, score: 7.50.
 
 0.994
KXA15368.1
Universal bacterial protein YeaZ; KEGG: bbp:BBPR_1080 3.9e-56 glycoprotease protein family; Psort location: Cytoplasmic, score: 7.50.
  
 0.992
KXA15207.1
Alanine racemase; KEGG: gvg:HMPREF0421_20911 4.2e-233 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
  
 0.940
KXA15369.1
KEGG: gvh:HMPREF9231_0823 1.8e-97 rimI; ribosomal-protein-alanine acetyltransferase K03789; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.926
KXA15366.1
KEGG: gvh:HMPREF9231_0826 1.1e-152 putative DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta; Psort location: Cellwall, score: 8.19.
       0.851
KXA15365.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 0.0051 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
       0.787
KXA15364.1
comEA protein; KEGG: hor:Hore_06940 2.6e-05 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.51.
       0.770
LeuS
leucine--tRNA ligase; KEGG: gva:HMPREF0424_0944 0. leuS; leucine--tRNA ligase K01869; Psort location: Cytoplasmic, score: 9.67.
       0.748
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.703
GroS
Chaperonin GroS; KEGG: apb:SAR116_1896 8.4e-22 chaperonin Cpn10 K04078; Psort location: Cytoplasmic, score: 9.97.
     
 0.693
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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