STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15242.1KEGG: gva:HMPREF0424_0921 3.1e-102 pyrE; orotate phosphoribosyltransferase K00762; Psort location: CytoplasmicMembrane, score: 9.55. (230 aa)    
Predicted Functional Partners:
KXA15378.1
KEGG: gvg:HMPREF0421_20750 1.4e-154 pyrF; orotidine-5'-phosphate decarboxylase K01591.
 
 
 0.995
KXA15379.1
Oxidoreductase NAD-binding domain protein; KEGG: bde:BDP_1094 1.3e-80 dihydroorotate dehydrogenase electron transfer subunit K02823; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.972
KXA15377.1
Amidohydrolase family protein; KEGG: gvg:HMPREF0421_20749 3.1e-228 pyrC; putative dihydroorotase K01465; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.964
KXA15376.1
KEGG: gvg:HMPREF0421_20748 8.6e-194 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.946
KXA15380.1
Putative dihydroorotate oxidase, catalytic subunit; KEGG: gvh:HMPREF9231_0812 4.6e-172 dihydroorotate dehydrogenase 1B K00226; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.943
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.898
KXA15250.1
KEGG: gvh:HMPREF9231_0805 1.1e-154 pyrF_1; orotidine 5'-phosphate decarboxylase K01591.
  
 
 0.894
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.892
CarB
KEGG: gvg:HMPREF0421_20758 0. carB; carbamoyl-phosphate synthase large subunit K01955; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.873
KXA15248.1
KEGG: gvg:HMPREF0421_20757 2.2e-213 carA; carbamoyl-phosphate synthase small subunit K01956; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.830
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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