STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15253.1KEGG: gvh:HMPREF9231_0802 1.5e-198 metK; methionine adenosyltransferase K00789; Psort location: Cytoplasmic, score: 9.97. (408 aa)    
Predicted Functional Partners:
KXA16818.1
NAD dependent epimerase/dehydratase family protein; KEGG: bbp:BBPR_0064 1.6e-112 nucleoside-diphosphate-sugar epimerase family protein.
   
 0.999
KXA15920.1
Large conductance mechanosensitive channel protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.999
KXA15373.1
KEGG: gvh:HMPREF9231_0819 0. metE; 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549; Psort location: Cytoplasmic, score: 7.50.
  
 0.889
KXA15254.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20763 0. priA; DNA replication factor Y; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase).
       0.874
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.836
rpoZ
KEGG: gvg:HMPREF0421_20761 2.2e-46 rpoZ; DNA-directed RNA polymerase subunit omega K03060.
       0.836
KXA15251.1
Guanylate kinase; KEGG: gvh:HMPREF9231_0804 4.8e-97 gmk; guanylate kinase K00942; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.822
KXA15725.1
S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein; KEGG: gvh:HMPREF9231_1173 1.1e-230 S-adenosyl-L-homocysteine hydrolase K01251; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.809
KXA15162.1
Amidophosphoribosyltransferase; KEGG: gvg:HMPREF0421_20875 1.6e-242 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.797
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.794
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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