STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15255.1Shikimate dehydrogenase substrate binding domain protein; KEGG: gvg:HMPREF0421_20764 1.3e-183 aroE; shikimate dehydrogenase K00014; Psort location: Cytoplasmic, score: 7.50. (374 aa)    
Predicted Functional Partners:
KXA16672.1
Chorismate synthase; KEGG: gvh:HMPREF9231_0449 1.0e-197 aroC; chorismate synthase K01736; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.936
KXA17061.1
KEGG: gvg:HMPREF0421_20573 8.1e-230 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800.
 
  
 0.932
KXA15256.1
Hypothetical protein; KEGG: apb:SAR116_1265 2.1e-39 P-loop-containing kinase K06958; Psort location: Cytoplasmic, score: 7.50.
       0.927
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.925
KXA15251.1
Guanylate kinase; KEGG: gvh:HMPREF9231_0804 4.8e-97 gmk; guanylate kinase K00942; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.913
KXA16670.1
3-dehydroquinate dehydratase, type II; KEGG: gvh:HMPREF9231_0451 1.1e-72 aroQ; 3-dehydroquinate dehydratase K03786.
  
  
 0.882
KXA15377.1
Amidohydrolase family protein; KEGG: gvg:HMPREF0421_20749 3.1e-228 pyrC; putative dihydroorotase K01465; Psort location: Cytoplasmic, score: 7.50.
     
 0.859
KXA16400.1
Prephenate dehydratase; KEGG: gvh:HMPREF9231_0415 6.7e-171 prephenate dehydratase K14170; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.844
KXA15257.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.824
KXA15154.1
RecA protein; KEGG: jde:Jden_1041 1.7e-135 recA protein K03553; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.813
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.