STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15273.1Hypothetical protein; KEGG: ral:Rumal_2514 2.4e-05 XRE family transcriptional regulator K00558; Psort location: Cytoplasmic, score: 7.50. (70 aa)    
Predicted Functional Partners:
KXA15274.1
Hypothetical protein; KEGG: rpe:RPE_0561 3.7e-10 DNA methylase N-4/N-6 domain-containing protein; K00571 site-specific DNA-methyltransferase (adenine-specific); Psort location: Cytoplasmic, score: 7.50.
       0.848
KXA15271.1
KEGG: gva:HMPREF0424_0874 0. nucleoside triphosphatase, D5 family; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.658
KXA15268.1
TnpX site-specific recombinase family protein.
 
   
 0.549
KXA15272.1
Hypothetical protein.
       0.534
KXA15270.1
Phage capsid family protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.526
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
       0.493
KXA17586.1
Repeat protein; KEGG: bbp:BBPR_0025 2.3e-15 alpha-L-arabinofuranosidase; Psort location: Cellwall, score: 9.26.
 
     0.485
KXA16045.1
Repeat protein; KEGG: cfl:Cfla_2912 4.3e-15 1,4-beta cellobiohydrolase; K01179 endoglucanase; Psort location: Cellwall, score: 10.00.
 
   
 0.457
KXA16290.1
M protein repeat protein; KEGG: lif:LINJ_16_1550 1.5e-41 putative kinesin; Psort location: Cellwall, score: 9.39.
 
     0.447
KXA17000.1
Hypothetical protein; KEGG: ddi:DDB_G0282959 1.1e-08 P-type ATPase; K01530 phospholipid-translocating ATPase.
  
    0.440
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.