STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15281.1Hypothetical protein. (93 aa)    
Predicted Functional Partners:
KXA15265.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.551
KXA15270.1
Phage capsid family protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.476
KXA16439.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 1.1e-38 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.39.
 
   
 0.460
KXA16000.1
Putative perfringolysin O; Psort location: Extracellular, score: 9.72.
 
 
   0.458
KXA15279.1
Hypothetical protein; KEGG: gva:HMPREF0424_0871 0. hypothetical protein; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 7.50.
     
 0.446
KXA15280.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.440
KXA17141.1
KEGG: bya:BANAU_3421 3.3e-82 Lipid A export ATP-binding/permease protein msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.430
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.