STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15297.1KEGG: gvh:HMPREF9231_0770 0. uvrA; excinuclease ABC subunit A K03701; Psort location: Cytoplasmic, score: 7.50. (1012 aa)    
Predicted Functional Partners:
UvrB
Excinuclease ABC, B subunit; KEGG: gvg:HMPREF0421_20977 0. uvrB; excision endonuclease subunit UvrB K03702; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
KXA15298.1
Excinuclease ABC, C subunit; KEGG: gvg:HMPREF0421_20802 0. uvrC; excision endonuclease subunit UvrC K03703; Psort location: Cytoplasmic, score: 9.95.
 
 0.999
KXA15435.1
KEGG: gvg:HMPREF0421_20714 0. trcF; transcription-repair coupling factor K03723; Psort location: Cytoplasmic, score: 9.97.
   
 0.983
KXA15144.1
Holliday junction DNA helicase RuvA; KEGG: gvg:HMPREF0421_20857 2.1e-80 ruvA; crossover junction ATP-dependent DNA helicase RuvA K03550; Psort location: Cytoplasmic, score: 9.67.
    
 0.884
KXA17598.1
DNA repair protein RecN; KEGG: apb:SAR116_2325 1.2e-47 ATPase K03631; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.820
KXA15143.1
KEGG: gvh:HMPREF9231_0714 3.2e-171 ruvB; Holliday junction DNA helicase RuvB K03551; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.817
KXA15154.1
RecA protein; KEGG: jde:Jden_1041 1.7e-135 recA protein K03553; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.816
KXA17013.1
KEGG: gvg:HMPREF0421_20484 3.7e-44 xseB; exodeoxyribonuclease VII small subunit K03602.
     
 0.796
KXA17014.1
KEGG: gvh:HMPREF9231_1073 2.5e-210 xseA; exodeoxyribonuclease VII large subunit K03601; Psort location: Cytoplasmic, score: 9.97.
     
 0.796
KXA17072.1
KEGG: gvh:HMPREF9231_0991 0. polA; DNA-directed DNA polymerase K02335; Psort location: Cytoplasmic, score: 7.50.
     
 0.770
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.