STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15317.1KEGG: gvg:HMPREF0421_20813 7.1e-112 rpe; ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50. (224 aa)    
Predicted Functional Partners:
Tkt
Transketolase; KEGG: gvg:HMPREF0421_20791 0. tkt; transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
 
 0.964
Tal
Transaldolase; KEGG: gvg:HMPREF0421_20790 4.6e-188 tal; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.890
KXA15316.1
KEGG: gvh:HMPREF9231_0759 1.1e-145 lgt; prolipoprotein diacylglyceryl transferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.873
KXA15318.1
KEGG: gvg:HMPREF0421_20814 1.4e-90 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.854
Pgk
Phosphoglycerate kinase; KEGG: gvg:HMPREF0421_20767 1.5e-203 pgk; phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.841
Gnd
KEGG: gvg:HMPREF0421_21329 2.7e-254 gnd2; phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 7.50.
   
 0.832
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.831
KXA16067.1
KEGG: gvg:HMPREF0421_21326 4.2e-272 zwf; glucose-6-phosphate dehydrogenase K00036; Psort location: CytoplasmicMembrane, score: 8.16.
  
 
 0.830
KXA15319.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.819
KXA15320.1
Putative small basic protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.810
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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