STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15321.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (293 aa)    
Predicted Functional Partners:
KXA15320.1
Putative small basic protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.985
KXA15319.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.976
KXA15322.1
Putative oxoglutarate dehydrogenase inhibitor; KEGG: mxa:MXAN_3956 5.4e-09 adenylate cyclase; K01768 adenylate cyclase.
       0.909
KXA15318.1
KEGG: gvg:HMPREF0421_20814 1.4e-90 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.860
KXA15323.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.856
KXA15317.1
KEGG: gvg:HMPREF0421_20813 7.1e-112 rpe; ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50.
       0.801
KXA15910.1
Hypothetical protein.
  
     0.775
KXA15316.1
KEGG: gvh:HMPREF9231_0759 1.1e-145 lgt; prolipoprotein diacylglyceryl transferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXA15147.1
KEGG: gvh:HMPREF9231_0710 7.3e-94 CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.762
ThrS
threonine--tRNA ligase; KEGG: gvg:HMPREF0421_20690 0. thrS; threonine--tRNA ligase K01868; Psort location: Cytoplasmic, score: 10.00.
       0.649
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.