STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15326.1DEAD/DEAH box helicase; KEGG: gvg:HMPREF0421_20822 0. helicase; K03727 ATP-dependent RNA helicase HelY; Psort location: Cytoplasmic, score: 7.50. (836 aa)    
Predicted Functional Partners:
KXA15325.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.877
KXA15327.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.856
KXA15328.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.856
KXA15329.1
KEGG: gvh:HMPREF9231_0746 2.1e-229 UTP--glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.784
KXA15371.1
Methyltransferase domain protein; KEGG: gvg:HMPREF0421_20741 2.8e-188 tRNA (adenine-N(1)-)-methyltransferase K07442; Psort location: Cytoplasmic, score: 7.50.
 
     0.688
TypA
KEGG: bbp:BBPR_0603 0. typA; GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.656
KXA17037.1
Putative FK506-binding protein; KEGG: gvg:HMPREF0421_20457 1.6e-66 fkbP; peptidyl-prolyl cis-trans isomerase.
       0.639
KXA16851.1
Aminopeptidase P domain protein; KEGG: gvh:HMPREF9231_0349 4.6e-282 metallopeptidase family M24 K01262; Psort location: Cytoplasmic, score: 9.97.
       0.639
KXA15324.1
KEGG: gvh:HMPREF9231_0751 1.5e-102 haloacid dehalogenase-like hydrolase; K01091 phosphoglycolate phosphatase.
       0.637
KXA16011.1
Putative glutamyl-queuosine tRNA(Asp) synthetase; KEGG: gvh:HMPREF9231_1361 1.8e-177 tRNA ligase class I, catalytic domain protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97.
       0.542
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.