STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15333.1AMP-binding enzyme; KEGG: gvg:HMPREF0421_20805 0. fadD; long-chain-fatty acid CoA ligase; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97. (685 aa)    
Predicted Functional Partners:
KXA15332.1
Peptide deformylase; KEGG: gvg:HMPREF0421_20806 2.2e-76 def2; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.
       0.838
KXA15334.1
Hypothetical protein.
       0.768
KXA15251.1
Guanylate kinase; KEGG: gvh:HMPREF9231_0804 4.8e-97 gmk; guanylate kinase K00942; Psort location: Cytoplasmic, score: 9.97.
   
 0.764
KXA15315.1
KEGG: gvh:HMPREF9231_0760 2.0e-139 cdsA; phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.720
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.631
KXA15331.1
Ribosomal protein S2; KEGG: apb:SAR116_0519 6.5e-54 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.618
RplE
Ribosomal protein L5; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.599
RplR
KEGG: apb:SAR116_2407 5.1e-15 50S ribosomal protein L18 K02881; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.560
ThrS
threonine--tRNA ligase; KEGG: gvg:HMPREF0421_20690 0. thrS; threonine--tRNA ligase K01868; Psort location: Cytoplasmic, score: 10.00.
  
 
 0.527
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
 
 0.490
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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