STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15337.1Hypothetical protein; KEGG: efi:OG1RF_11260 1.4e-10 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00. (206 aa)    
Predicted Functional Partners:
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.885
KXA15336.1
KEGG: gvh:HMPREF9231_0730 4.2e-169 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.796
KXA15339.1
RNA-binding protein, YhbY family.
       0.789
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
       0.692
KXA17062.1
Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.586
KXA16202.1
Raf-like protein.
  
    0.491
KXA15165.1
Arylsulfatase; KEGG: gvh:HMPREF9231_0690 2.4e-292 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.457
KXA16943.1
Cobalt transport protein; KEGG: bde:BDP_1327 3.4e-112 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
       0.448
KXA17222.1
Putative membrane protein; KEGG: bqy:MUS_4455 1.8e-09 ydeD; phosphate acetyltransferase (phosphotransacetylase); Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.445
KXA16861.1
KEGG: gvg:HMPREF0421_21167 3.9e-127 thiamine diphosphokinase K00949.
  
     0.445
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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