STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15134.1DEAD/DEAH box helicase; KEGG: bnm:BALAC2494_00455 0. Hydrolase acting on acid anhydrides in phosphorous-containing anhydrides; Psort location: Cytoplasmic, score: 7.50. (842 aa)    
Predicted Functional Partners:
KXA15133.1
Putative replication-associated recombination protein A; KEGG: bde:BDP_0795 5.3e-194 ATPase AAA K07478.
       0.844
KXA16970.1
KEGG: gvg:HMPREF0421_20524 0. hrpA; ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA; Psort location: Cytoplasmic, score: 7.50.
 
     0.771
KXA15310.1
KEGG: cfu:CFU_2615 2.5e-22 ABC transporter substrate-binding protein K02030.
       0.692
KXA15311.1
ABC transporter, permease protein; KEGG: apb:SAR116_1445 1.1e-19 polar amino acid uptake family ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
       0.692
KXA15312.1
ABC transporter, permease protein; KEGG: llm:llmg_1942 9.3e-25 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
       0.692
KXA17221.1
Hypothetical protein; KEGG: dpp:DICPUDRAFT_150076 2.1e-07 hypothetical protein; K14437 chromodomain-helicase-DNA-binding protein 7.
 
     0.674
KXA16008.1
Pyridoxal phosphate enzyme, YggS family; KEGG: axy:AXYL_06119 3.6e-30 alanine racemase K06997; Psort location: Cytoplasmic, score: 7.50.
       0.637
KXA15136.1
Pseudouridylate synthase; KEGG: gvg:HMPREF0421_20849 8.7e-130 rluB; ribosomal large subunit pseudouridine synthase B K06178; Psort location: Cytoplasmic, score: 9.97.
       0.630
KXA16859.1
YbaK/EbsC protein; KEGG: ent:Ent638_0960 4.1e-29 hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.619
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
    0.614
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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