STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15157.1KEGG: gvh:HMPREF9231_0699 9.2e-87 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00. (209 aa)    
Predicted Functional Partners:
KXA15156.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 9.7e-05 fadD; long-chain-fatty-acid--CoA ligase K03743.
 
  
 0.982
KXA15155.1
Hypothetical protein.
       0.912
KXA15158.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 2.0e-100 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.856
KXA15154.1
RecA protein; KEGG: jde:Jden_1041 1.7e-135 recA protein K03553; Psort location: Cytoplasmic, score: 9.97.
     
 0.790
KXA15153.1
Regulatory protein RecX; Psort location: Cytoplasmic, score: 7.50.
       0.771
KXA16649.1
KEGG: gvh:HMPREF9231_0969 8.6e-155 miaA; tRNA dimethylallyltransferase K00791; Psort location: Cytoplasmic, score: 7.50.
     
 0.703
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.656
KXA16363.1
RelA/SpoT domain protein; KEGG: bbp:BBPR_1279 1.5e-94 relA2; GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
       0.643
KXA15895.1
Ferritin-like protein; KEGG: gvg:HMPREF0421_20160 7.6e-76 DNA protection during starvation protein K04047; Psort location: Cytoplasmic, score: 9.97.
     
 0.643
KXA16849.1
Hypothetical protein; KEGG: gvg:HMPREF0421_21191 0. metallo-beta-lactamase; K12574 ribonuclease J; Psort location: Cytoplasmic, score: 7.50.
       0.639
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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