STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15166.1Hypothetical protein; KEGG: ase:ACPL_3309 2.7e-09 Endo-1,4-beta-xylanase Z; Psort location: CytoplasmicMembrane, score: 10.00. (459 aa)    
Predicted Functional Partners:
KXA15167.1
Hypothetical protein; KEGG: bnm:BALAC2494_00539 7.3e-181 lysine--tRNA ligase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.964
KXA16034.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.744
KXA16066.1
Putative opcA protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.617
KXA15946.1
KEGG: bbp:BBPR_1827 4.0e-77 protein-disulfide isomerase.
 
   
 0.523
KXA17134.1
ABC transporter, substrate-binding protein.
 
  
 0.506
KXA16197.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20267 4.1e-139 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.502
KXA16810.1
MaoC-like protein; KEGG: gvg:HMPREF0421_21228 0. fas; type I multifunctional fatty acid synthase; K11533 fatty acid synthase, bacteria type.
 
   
 0.495
KXA16811.1
KEGG: gvh:HMPREF9231_0309 1.4e-51 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase; Psort location: Cytoplasmic, score: 7.50.
  
     0.481
KXA17062.1
Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.462
KXA15165.1
Arylsulfatase; KEGG: gvh:HMPREF9231_0690 2.4e-292 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.461
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.