STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15192.1KEGG: bde:BDP_1889 2.5e-68 vexP2; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.99. (213 aa)    
Predicted Functional Partners:
KXA15193.1
Putative ATP synthase F0, A subunit; KEGG: sgg:SGGBAA2069_c10000 1.8e-20 yijC; ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.989
KXA15194.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_0335 3.0e-33 yclI; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.973
KXA15421.1
KEGG: crd:CRES_0317 9.1e-64 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.907
KXA15968.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.8e-74 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.832
KXA17459.1
KEGG: gvg:HMPREF0421_20290 1.4e-234 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
   
0.805
KXA17504.1
KEGG: pva:Pvag_1909 1.0e-48 ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.799
KXA16646.1
phenylalanine--tRNA ligase, alpha subunit; KEGG: gvg:HMPREF0421_20584 6.5e-189 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889; Psort location: Cytoplasmic, score: 10.00.
 
 
 
 0.799
KXA16352.1
KEGG: crd:CRES_0317 7.1e-07 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.794
KXA17460.1
KEGG: bde:BDP_2113 2.5e-228 ABC transporter ATP-binding protein/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
   
0.746
KXA16041.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_5143 7.8e-11 Macrolide export ATP-binding/permease protein macB 1 K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.706
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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