STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15201.1Citrate transporter; Psort location: CytoplasmicMembrane, score: 10.00. (398 aa)    
Predicted Functional Partners:
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
    0.747
KXA15207.1
Alanine racemase; KEGG: gvg:HMPREF0421_20911 4.2e-233 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.710
KXA15206.1
Putative dGTPase; KEGG: gvg:HMPREF0421_20910 9.9e-225 putative dGTPase; K01129 dGTPase; Psort location: Cytoplasmic, score: 7.50.
  
    0.701
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.699
KXA15205.1
DNA primase; KEGG: gvh:HMPREF9231_0661 0. dnaG; DNA primase K02316.
       0.692
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.538
KXA16947.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: gvg:HMPREF0421_20549 8.4e-93 ptpA; putative protein-tyrosine-phosphatase K01104; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.522
KXA15202.1
Acetolactate synthase; KEGG: gvg:HMPREF0421_20896 7.8e-296 alsS; acetolactate synthase K01652; Psort location: Cytoplasmic, score: 9.97.
     
 0.495
KXA16952.1
KEGG: apb:SAR116_0757 5.2e-06 universal stress protein family protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.476
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
       0.474
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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