STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15202.1Acetolactate synthase; KEGG: gvg:HMPREF0421_20896 7.8e-296 alsS; acetolactate synthase K01652; Psort location: Cytoplasmic, score: 9.97. (571 aa)    
Predicted Functional Partners:
IlvE
KEGG: gvh:HMPREF9231_0841 1.9e-205 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.907
KXA16185.1
Trypsin; KEGG: gvg:HMPREF0421_20188 6.7e-258 htrA; serine protease HtrA K08372.
    
 0.885
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.837
LeuS
leucine--tRNA ligase; KEGG: gva:HMPREF0424_0944 0. leuS; leucine--tRNA ligase K01869; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.724
KXA15299.1
KEGG: gvh:HMPREF9231_0768 3.4e-192 IMP dehydrogenase family protein; K00088 IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.704
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.702
IleS
isoleucine--tRNA ligase; KEGG: gvh:HMPREF9231_1070 0. ileS; isoleucine--tRNA ligase K01870; Psort location: Cytoplasmic, score: 9.97.
     
 0.699
KXA15901.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.679
KXA16299.1
Homoserine dehydrogenase; KEGG: gvh:HMPREF9231_1241 1.8e-218 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.677
KXA16648.1
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 7.7e-35 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.662
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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