STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA15204.1KEGG: gva:HMPREF0424_1049 0. glycosyl hydrolase family 38 N-terminal domain protein; K01191 alpha-mannosidase; Psort location: Cytoplasmic, score: 7.50. (1033 aa)    
Predicted Functional Partners:
KXA15203.1
KEGG: gva:HMPREF0424_1044 4.1e-171 inosine-uridine preferring nucleoside hydrolase; K01239 purine nucleosidase.
  
    0.756
KXA16271.1
ABC transporter, permease protein; KEGG: rcu:RCOM_1803670 4.0e-31 L-arabinose transport system permease protein araP, putative; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.649
KXA15101.1
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 4.1e-08 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: CytoplasmicMembrane, score: 9.51.
 
   
 0.554
KXA15603.1
Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 3.7e-28 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.538
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
    0.534
KXA16176.1
Alpha amylase, catalytic domain protein; KEGG: gvh:HMPREF9231_0082 0. malL_1; oligo-1,6-glucosidase 1 K01182; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.518
KXA16287.1
KEGG: gvh:HMPREF9231_1301 0. glycosyl hydrolase family protein.
 
   
 0.504
KXA15205.1
DNA primase; KEGG: gvh:HMPREF9231_0661 0. dnaG; DNA primase K02316.
       0.500
RpoA
KEGG: gvh:HMPREF9231_0263 6.9e-169 rpoA; DNA-directed RNA polymerase subunit alpha K03040; Psort location: Cytoplasmic, score: 9.97.
    
   0.406
KXA15882.1
ROK family protein; KEGG: gvg:HMPREF0421_20174 6.7e-155 glcK; putative glucokinase K00845; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.404
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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