STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcb5Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; 215c0002; similar to YegS from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
terC
Membrane protein; 215c0001; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
    0.578
BAQ43631.1
Hypothetical protein; 215d0002; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
BAQ43630.1
Hypothetical protein; CDS was addded manually by using GenomeMatcher.
       0.556
pgpB-2
Phosphoesterase; 214c0015; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.495
focA
Formate/nitrite transporter family protein; 150c0009; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
  
 0.418
BAQ43875.1
Protein of unknown function UPF0057; 29c0001; CDS was addded manually by using GenomeMatcher.
 
    0.413
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.