STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauC-2ABC transporter permease; 192c0009; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
tauB-2
ABC transporter ATP-binding protein; 192c0008; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
tauA-2
ABC transporter substrate-binding protein; 192c0010; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.896
tauB-11
ABC transporter related; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
 0.842
tauB
Sulfonate ABC transporter ATP-binding protein; 441c0007; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
 0.832
tauB-8
Sulfonate ABC transporter ATP-binding protein; 285d0029; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.816
tauB-13
ABC transporter; 18d0013; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
tauA-11
ABC transporter substrate-binding protein; 269c0036; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.768
tauA-12
Taurine ABC transporter substrate-binding protein; 51c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
  
 0.768
tauB-4
Mannosyltransferase; 291d0044; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
 0.767
tauB-3
ABC transporter; 192d0008; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.762
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.