STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompR-2Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; 99d0002; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
baeS-52
Signal transduction histidine kinase; 99d0003; Derived by automated computational analysis using Genaris Flexible Annotator.
 
 0.996
baeS-28
Histidine kinase; 334c0005; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 0.929
baeS-11
Multi-sensor hybrid histidine kinase; 151d0002; CDS was addded manually by using GenomeMatcher.
 
 0.889
baeS-23
ATPase; 147c0001; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
 0.888
baeS-54
Signal transduction histidine kinase; 123c0011; Derived by automated computational analysis using Genaris Flexible Annotator.
 
 
0.831
baeS-42
Histidine kinase; 17d0002; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.830
baeS-46
Histidine kinase; 169c0016; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
 0.825
baeS-7
Histidine kinase; 19d0005; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
 
 0.807
baeS-34
Histidine kinase; 220d0041; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
 
 0.807
baeS-6
Histidine kinase; 97d0008; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.793
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.