STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ44674.1Hypothetical protein; 21d0007; Derived by automated computational analysis using gene prediction method: Protein Homology. (679 aa)    
Predicted Functional Partners:
ttg2B
ABC transporter permease; 245c0016; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.972
BAQ44675.1
Flagellar motor protein; 21d0008; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.960
BAQ44676.1
Hypothetical protein; 21d0009; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
hepA
Superfamily II DNA/RNA helicases, SNF2 family; 21d0010; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
ttg2A
Iron ABC transporter ATP-binding protein; 245c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
 
 0.857
BAQ46343.1
Toluene tolerance protein; 6d0006; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.754
hsdS
Restriction endonuclease S subunits; 21d0006; CDS was addded manually by using GenomeMatcher.
       0.596
livK-6
ABC transporter substrate-binding protein; 126d0026; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
motB
Flagellar motor protein; 267c0005; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.472
sdhA
3-ketosteroid dehydrogenase; 126d0036; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.459
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.