Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAQ44871.1 | acrA-4 | Maq22A_c07755 | Maq22A_c07760 | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter, RND family, MFP subunit; 347c0014; CDS was addded manually by using GenomeMatcher; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.435 |
BAQ44871.1 | acrB-2 | Maq22A_c07755 | Maq22A_c07770 | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acriflavine resistance protein B; 347c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
BAQ44871.1 | paaJ | Maq22A_c07755 | Maq22A_c07750 | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | Beta-ketoadipyl CoA thiolase; 347d0015; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher; Belongs to the thiolase-like superfamily. Thiolase family. | 0.527 |
acrA-4 | BAQ44871.1 | Maq22A_c07760 | Maq22A_c07755 | Efflux transporter, RND family, MFP subunit; 347c0014; CDS was addded manually by using GenomeMatcher; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
acrA-4 | acrB-2 | Maq22A_c07760 | Maq22A_c07770 | Efflux transporter, RND family, MFP subunit; 347c0014; CDS was addded manually by using GenomeMatcher; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Acriflavine resistance protein B; 347c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
acrB-2 | BAQ44871.1 | Maq22A_c07770 | Maq22A_c07755 | Acriflavine resistance protein B; 347c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
acrB-2 | acrA-4 | Maq22A_c07770 | Maq22A_c07760 | Acriflavine resistance protein B; 347c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. | Efflux transporter, RND family, MFP subunit; 347c0014; CDS was addded manually by using GenomeMatcher; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.997 |
paaJ | BAQ44871.1 | Maq22A_c07750 | Maq22A_c07755 | Beta-ketoadipyl CoA thiolase; 347d0015; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein; 347c0015; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |