STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAQ45043.1Hypothetical protein; 214c0005; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher. (203 aa)    
Predicted Functional Partners:
BAQ43675.1
Calcium-binding protein; 122d0018; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
     0.739
BAQ43996.1
Hypothetical protein; 293d0004; Derived by automated computational analysis using gene prediction method: GeneMarkS+. Start codon location was manually corrected by using GenomeMatcher; Belongs to the UPF0335 family.
  
     0.734
BAQ44472.1
Cytoplasmic protein; 11c0082; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
BAQ44717.1
Hypothetical protein; 276d0025; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0335 family.
  
     0.723
gst-6
Glutathione S-transferase; 139d0014; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
BAQ46003.1
Double-strand break repair protein AddB; 219d0013; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
     0.689
holC
DNA polymerase III subunit chi; 139c0005; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
  
     0.677
BAQ44358.1
Putative two component transcriptionalregulator, winged helix family; 11c0040; CDS was addded manually by using GenomeMatcher.
  
     0.668
ftsQ
Peptide transporter; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.661
dnaA-2
ATPase; 18d0003; Derived by automated computational analysis using gene prediction method: Protein Homology; involved in DNA replication initiation.
  
     0.642
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.