STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiBStress-induced protein; 344c0004; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)    
Predicted Functional Partners:
BAQ47612.1
Hypothetical protein; 220c0056; CDS was addded manually by using GenomeMatcher.
  
  
 0.832
BAQ47704.1
Hypothetical protein; 220c0005; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.832
BAQ47644.1
Hypothetical protein; 220d0032; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.749
BAQ44600.1
Hypothetical protein; 97c0001; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
  
 0.735
BAQ44902.1
Predicted outer membrane protein; 181c0001; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.603
BAQ46457.1
Hypothetical protein; 255d0002; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.521
BAQ46816.1
Hypothetical protein; 91c0002; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.521
BAQ45015.1
Hypothetical protein; 214d0016; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
  
 0.479
BAQ45084.1
Predicted membrane protein; 95d0007; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
osmC
Peroxiredoxin OsmC; 214c0006; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.440
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.