STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baeS-53Signal transduction histidine kinase; 195c0010; Derived by automated computational analysis using Genaris Flexible Annotator. (902 aa)    
Predicted Functional Partners:
baeS-13
Signal transduction histidine kinase; 421c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
0.980
baeS-29
Chemotaxis protein CheY; 41c0013; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
0.978
baeS-38
Chemotaxis protein CheY; 220c0043; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
0.978
baeS-46
Histidine kinase; 169c0016; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
0.977
baeS-28
Histidine kinase; 334c0005; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
0.976
baeS-42
Histidine kinase; 17d0002; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.976
baeS-23
ATPase; 147c0001; Derived by automated computational analysis using gene prediction method: Protein Homology. Start codon location was manually corrected by using GenomeMatcher.
 
 
0.975
baeS-2
Signal transduction histidine kinase; 122c0004; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.974
baeS-18
Chemotaxis protein CheY; 20c0026; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.974
baeS-15
Signal transduction histidine kinase; 302c0017; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.972
Your Current Organism:
Methylobacterium aquaticum
NCBI taxonomy Id: 270351
Other names: CCM 7218, CECT 5998, CIP 108333, DSM 16371, M. aquaticum, Methylobacterium aquaticum Gallego et al. 2005, strain GR16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.