Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHK_0619 | CHK_0620 | Xylose ABC transporter, substrate-binding component. | Xylulose kinase; Belongs to the FGGY kinase family. | 0.633 |
CHK_0619 | CHK_0621 | Xylose ABC transporter, substrate-binding component. | Sorbitol dehydrogenase. | 0.640 |
CHK_0619 | CHK_0622 | Xylose ABC transporter, substrate-binding component. | Dihydrolipoamide dehydrogenase of acetoin dehydrogenase. | 0.546 |
CHK_0619 | CHK_0623 | Xylose ABC transporter, substrate-binding component. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.529 |
CHK_0619 | CHK_0624 | Xylose ABC transporter, substrate-binding component. | Fructose-bisphosphate aldolase class II. | 0.515 |
CHK_0619 | CHK_0625 | Xylose ABC transporter, substrate-binding component. | Acetoin dehydrogenase E1 component beta-subunit. | 0.474 |
CHK_0619 | CHK_0626 | Xylose ABC transporter, substrate-binding component. | Acetoin dehydrogenase E1 component alpha-subunit. | 0.474 |
CHK_0620 | CHK_0619 | Xylulose kinase; Belongs to the FGGY kinase family. | Xylose ABC transporter, substrate-binding component. | 0.633 |
CHK_0620 | CHK_0621 | Xylulose kinase; Belongs to the FGGY kinase family. | Sorbitol dehydrogenase. | 0.807 |
CHK_0620 | CHK_0622 | Xylulose kinase; Belongs to the FGGY kinase family. | Dihydrolipoamide dehydrogenase of acetoin dehydrogenase. | 0.664 |
CHK_0620 | CHK_0623 | Xylulose kinase; Belongs to the FGGY kinase family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.642 |
CHK_0620 | CHK_0624 | Xylulose kinase; Belongs to the FGGY kinase family. | Fructose-bisphosphate aldolase class II. | 0.628 |
CHK_0620 | CHK_0625 | Xylulose kinase; Belongs to the FGGY kinase family. | Acetoin dehydrogenase E1 component beta-subunit. | 0.572 |
CHK_0620 | CHK_0626 | Xylulose kinase; Belongs to the FGGY kinase family. | Acetoin dehydrogenase E1 component alpha-subunit. | 0.572 |
CHK_0621 | CHK_0619 | Sorbitol dehydrogenase. | Xylose ABC transporter, substrate-binding component. | 0.640 |
CHK_0621 | CHK_0620 | Sorbitol dehydrogenase. | Xylulose kinase; Belongs to the FGGY kinase family. | 0.807 |
CHK_0621 | CHK_0622 | Sorbitol dehydrogenase. | Dihydrolipoamide dehydrogenase of acetoin dehydrogenase. | 0.664 |
CHK_0621 | CHK_0623 | Sorbitol dehydrogenase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.647 |
CHK_0621 | CHK_0624 | Sorbitol dehydrogenase. | Fructose-bisphosphate aldolase class II. | 0.661 |
CHK_0621 | CHK_0625 | Sorbitol dehydrogenase. | Acetoin dehydrogenase E1 component beta-subunit. | 0.598 |
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