STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_0668Phage replication initiation protein. (270 aa)    
Predicted Functional Partners:
CHK_0669
Hypothetical protein.
 
     0.896
CHK_0670
TrsK-like protein.
 
     0.889
CHK_0671
Hypothetical protein.
 
  
 0.868
CHK_0651
Hypothetical protein.
  
     0.769
CHK_0654
Hypothetical protein.
  
     0.768
CHK_0754
Hypothetical protein.
  
     0.767
CHK_0755
RLX protein.
 
     0.767
CHK_0647
Hypothetical protein.
 
     0.759
CHK_0648
Hypothetical protein.
  
     0.757
CHK_0652
Mature parasite-infected erythrocyte surface antigen (MESA) or PfEMP2.
 
     0.745
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.