STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_1069Hypothetical protein. (242 aa)    
Predicted Functional Partners:
CHK_1070
Bsu YqfO NIF3/CutA domain; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
  
 0.962
CHK_1002
Osmosensitive K+ channel histidine kinase KdpD.
  
 
  0.879
CHK_1004
Sensory box histidine kinase/response regulator.
  
 
  0.879
CHK_1975
Chemotaxis protein CheV.
    
  0.795
CHK_1071
Putative tRNA-m1A22 methylase.
       0.770
CHK_0176
Hypothetical protein.
  
     0.748
CHK_0021
Putative internalin.
  
     0.716
CHK_0072
Putative calcium binding hemolysin protein.
 
     0.691
CHK_2695
Putative N6-adenine-specific RNA methylase containing THUMP domain.
 
     0.669
CHK_3141
Hypothetical protein.
  
     0.654
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.