STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_1159ATP-utilizing enzyme of the PP-loop superfamily. (252 aa)    
Predicted Functional Partners:
CHK_0403
Transcriptional regulator.
 
  
 0.868
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.783
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.777
CHK_2825
Ribulose-1,5-bisphosphate carboxylase, Type III; Belongs to the RuBisCO large chain family.
    
  0.609
CHK_1161
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
 
     0.532
CHK_1191
Iron-sulfur cluster-binding protein.
 
    0.521
CHK_1105
Oxidoreductase.
 
    0.495
CHK_1008
Fe-S oxidoreductase.
 
    0.475
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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