STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHK_1293Acetyltransferase. (351 aa)    
Predicted Functional Partners:
CHK_1294
Hypothetical protein.
 
     0.920
CHK_1295
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.660
atpB
ATP synthase F0 sector subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
     0.560
CHK_1292
Hypothetical protein.
       0.496
CHK_1431
Stage V sporulation protein B.
  
     0.464
CHK_1296
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.448
CHK_1462
Lactoylglutathione lyase.
  
     0.437
CHK_1570
Hypothetical protein.
   
    0.414
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.