Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHK_0181 | CHK_0375 | Two-component response regulator. | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | 0.503 |
CHK_0181 | CHK_0547 | Two-component response regulator. | Sensory box histidine kinase/response regulator. | 0.799 |
CHK_0181 | CHK_1002 | Two-component response regulator. | Osmosensitive K+ channel histidine kinase KdpD. | 0.976 |
CHK_0181 | CHK_1004 | Two-component response regulator. | Sensory box histidine kinase/response regulator. | 0.976 |
CHK_0181 | CHK_1005 | Two-component response regulator. | Sensory box/GGDEF family protein. | 0.749 |
CHK_0181 | CHK_1359 | Two-component response regulator. | DNA-binding response regulator. | 0.516 |
CHK_0181 | CHK_1756 | Two-component response regulator. | Phosphate regulon sensor protein PhoR (SphS). | 0.946 |
CHK_0195 | CHK_0375 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | 0.516 |
CHK_0195 | CHK_0547 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box histidine kinase/response regulator. | 0.813 |
CHK_0195 | CHK_1002 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Osmosensitive K+ channel histidine kinase KdpD. | 0.984 |
CHK_0195 | CHK_1004 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box histidine kinase/response regulator. | 0.978 |
CHK_0195 | CHK_1005 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box/GGDEF family protein. | 0.763 |
CHK_0195 | CHK_1359 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | DNA-binding response regulator. | 0.501 |
CHK_0195 | CHK_1756 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Phosphate regulon sensor protein PhoR (SphS). | 0.929 |
CHK_0375 | CHK_0181 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Two-component response regulator. | 0.503 |
CHK_0375 | CHK_0195 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | 0.516 |
CHK_0375 | CHK_0547 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box histidine kinase/response regulator. | 0.806 |
CHK_0375 | CHK_1002 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Osmosensitive K+ channel histidine kinase KdpD. | 0.976 |
CHK_0375 | CHK_1004 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box histidine kinase/response regulator. | 0.976 |
CHK_0375 | CHK_1005 | Phosphate regulon transcriptional regulatory protein PhoB (SphR). | Sensory box/GGDEF family protein. | 0.749 |
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