Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CHK_0956 | CHK_1961 | CHK_0956 | CHK_1961 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar motor switch protein FliN. | 0.989 |
| CHK_0956 | CHK_1966 | CHK_0956 | CHK_1966 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.929 |
| CHK_0956 | CHK_1967 | CHK_0956 | CHK_1967 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar biosynthesis protein FliS. | 0.948 |
| CHK_0956 | CHK_1973 | CHK_0956 | CHK_1973 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.948 |
| CHK_0956 | CHK_1994 | CHK_0956 | CHK_1994 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar protein. | 0.441 |
| CHK_0956 | CHK_1997 | CHK_0956 | CHK_1997 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.973 |
| CHK_0956 | CHK_1998 | CHK_0956 | CHK_1998 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar hook-associated protein FlgL. | 0.963 |
| CHK_0956 | csrA | CHK_0956 | CHK_2001 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.735 |
| CHK_0956 | fliW | CHK_0956 | CHK_2000 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.899 |
| CHK_1961 | CHK_0956 | CHK_1961 | CHK_0956 | Flagellar motor switch protein FliN. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.989 |
| CHK_1961 | CHK_1966 | CHK_1961 | CHK_1966 | Flagellar motor switch protein FliN. | Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.995 |
| CHK_1961 | CHK_1967 | CHK_1961 | CHK_1967 | Flagellar motor switch protein FliN. | Flagellar biosynthesis protein FliS. | 0.992 |
| CHK_1961 | CHK_1973 | CHK_1961 | CHK_1973 | Flagellar motor switch protein FliN. | Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.989 |
| CHK_1961 | CHK_1994 | CHK_1961 | CHK_1994 | Flagellar motor switch protein FliN. | Flagellar protein. | 0.782 |
| CHK_1961 | CHK_1997 | CHK_1961 | CHK_1997 | Flagellar motor switch protein FliN. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.999 |
| CHK_1961 | CHK_1998 | CHK_1961 | CHK_1998 | Flagellar motor switch protein FliN. | Flagellar hook-associated protein FlgL. | 0.988 |
| CHK_1961 | csrA | CHK_1961 | CHK_2001 | Flagellar motor switch protein FliN. | Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.743 |
| CHK_1961 | fliW | CHK_1961 | CHK_2000 | Flagellar motor switch protein FliN. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.909 |
| CHK_1966 | CHK_0956 | CHK_1966 | CHK_0956 | Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.929 |
| CHK_1966 | CHK_1961 | CHK_1966 | CHK_1961 | Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliN. | 0.995 |
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