Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CHK_2139Dihydroxyacetone kinase, ATP-dependent. (205 aa)    
Predicted Functional Partners:
CHK_2138
Dihydroxyacetone kinase, ATP-dependent.
 
 0.999
CHK_2137
Glycerol dehydrogenase.
  
 
 0.914
CHK_0135
Glycerol-3-phosphate dehydrogenase.
    
  0.795
CHK_1295
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.712
CHK_1204
Glycerol dehydrogenase.
  
 
 0.693
CHK_0886
Glycerol-1-phosphate dehydrogenase [NAD(P)].
  
 
 0.660
CHK_1917
Glycerol-1-phosphate dehydrogenase [NAD(P)].
  
 
 0.660
CHK_1810
Phosphoenolpyruvate-protein phosphotransferase of PTS system; Belongs to the PEP-utilizing enzyme family.
  
 
 0.607
CHK_0895
Catabolite repression HPr-like protein Crh.
  
 
 0.550
CHK_1815
Catabolite repression HPr-like protein Crh.
  
 
 0.550
Your Current Organism:
Catabacter hongkongensis
NCBI taxonomy Id: 270498
Other names: C. hongkongensis, CCUG 54229, Catabacter hongkongensis Lau et al. 2014, JCM 17853, strain HKU16
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